Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur transfer complex subunit, tusc/dsrf | ALO42_01581 | Not Available | Negative | 1114272 - 1114634 | 12868.4 |
| hypothetical protein | ALO42_102807 | Not Available | Positive | 1114609 - 1115136 | 19705.6 |
| citrate/protein symporter, mfs family | ALO42_01582 | Not Available | Positive | 1115263 - 1116564 | 46772.9 |
| putative abc transporter, periplasmic substrate-binding protein | ALO42_100118 | Not Available | Positive | 1116574 - 1117359 | 27534.6 |
| lysr family transcriptional regulator | ALO42_01583 | Not Available | Negative | 1117345 - 1118253 | 33250.4 |
| dead/deah box helicase | ALO42_01584 | Not Available | Negative | 1118328 - 1120580 | 82626.2 |
| uncharacterized protein | ALO42_01585 | Not Available | Negative | 1120555 - 1121850 | 47522.8 |
| Trna-ser | Not Available | Not Available | Positive | 1124542 - 1124629 | Not Available |
| ycca-like protein | ALO42_01586 | Not Available | Positive | 1124715 - 1125422 | 25552.8 |
| alkaline metalloproteinase apra | ALO42_01587 | Not Available | Positive | 1125903 - 1127333 | 49331.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









