Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsk | ALO42_100050 | Not Available | Positive | 1103985 - 1106390 | 87631.7 |
| outer-membrane lipoprotein carrier protein | ALO42_01573 | Not Available | Positive | 1106467 - 1107090 | 22880.6 |
| recombination factor protein rara | ALO42_01574 | Not Available | Positive | 1107109 - 1108431 | 48784.2 |
| putative fluoride ion transporter crcb | ALO42_01575 | Not Available | Positive | 1108431 - 1108805 | 13077.3 |
| serine--trna ligase | ALO42_01576 | Not Available | Positive | 1108822 - 1110102 | 47262.4 |
| siroheme synthase | ALO42_01577 | Not Available | Positive | 1110103 - 1111497 | 50042.8 |
| glutathione s-transferase domain-containing protein | ALO42_01578 | Not Available | Negative | 1111548 - 1112546 | 37894.3 |
| anthranilate phosphoribosyltransferase like | ALO42_100058 | Not Available | Negative | 1112643 - 1113644 | 37384.9 |
| sulfurtransferase | ALO42_01579 | Not Available | Negative | 1113641 - 1113976 | 12204.7 |
| sulfur transfer complex subunit, tusb/dsrh | ALO42_01580 | Not Available | Negative | 1113973 - 1114272 | 10698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









