Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | ALO42_01555 | Not Available | Negative | 1084282 - 1084695 | 15143.8 |
| isocitrate lyase | ALO42_01556 | Not Available | Negative | 1085159 - 1086484 | 48639.3 |
| type ii/iii secretion system-associated protein | ALO42_01557 | Not Available | Negative | 1087013 - 1087762 | 26891.3 |
| gnat family acetyltransferase | ALO42_01558 | Not Available | Negative | 1087943 - 1088365 | 15604.6 |
| uncharacterized protein | ALO42_01559 | Not Available | Negative | 1088358 - 1089572 | 45753.1 |
| adenylosuccinate lyase | ALO42_01560 | Not Available | Negative | 1089585 - 1090955 | 50870.9 |
| hypothetical protein | ALO42_100901 | Not Available | Positive | 1090959 - 1091108 | 5440.3 |
| high frequency lysogenization protein hfld -like protein | ALO42_01561 | Not Available | Negative | 1091087 - 1091707 | 22884.0 |
| pp_00974 | ALO42_01562 | Not Available | Negative | 1091707 - 1092837 | Not Available |
| nudix family hydrolase | ALO42_01563 | Not Available | Negative | 1092898 - 1093344 | 16838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









