Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein f | ALO42_01005 | Not Available | Negative | 1047976 - 1050264 | 83895.0 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | ALO42_01006 | Not Available | Negative | 1051198 - 1051992 | 28837.4 |
| putative tryptophan 2-monooxygenase | ALO42_04540 | Not Available | Negative | 1052008 - 1053687 | 62299.4 |
| hypothetical protein | ALO42_101733 | Not Available | Positive | 1055310 - 1055435 | 4814.78 |
| helix-turn-helix xre-family protein | ALO42_01008 | Not Available | Positive | 1055707 - 1056030 | 12357.1 |
| toxin module hipa-like protein | ALO42_01009 | Not Available | Positive | 1056030 - 1057256 | 45514.9 |
| gcn5-family n-acetyltransferase | ALO42_01010 | Not Available | Positive | 1057433 - 1057987 | 20831.0 |
| non-ribosomal peptide synthetase | ALO42_01011 | Not Available | Positive | 1058240 - 1062280 | 146345.0 |
| phosphopantetheinyl transferase-like protein | ALO42_04541 | Not Available | Positive | 1062277 - 1062824 | 19470.6 |
| hypothetical protein | ALO42_102886 | Not Available | Positive | 1062917 - 1063048 | 5083.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









