Heyndrickxia shackletonii strain LMG 18435

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Heyndrickxia

Description

Heyndrickxia shackletonii strain LMG 18435 is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella. This feature suggests that the organism is motile, which could provide advantages in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival. The strain is cataloged under the accession number LJJC00000000.1, which provides a reference point for genetic and genomic studies. As a member of the microbial community, Heyndrickxia shackletonii strain LMG 18435 could play a role in nutrient cycling or other ecological processes, although specific ecological interactions remain to be elucidated. The combination of its Gram-positive nature and rod shape is indicative of its cell wall structure, which may influence its interactions with other microorganisms and the environment. Additionally, the presence of flagella may allow it to navigate toward favorable conditions or away from detrimental ones, showcasing its potential role in ecological dynamics. In summary, Heyndrickxia shackletonii strain LMG 18435 exhibits significant traits such as being Gram-positive, rod-shaped, motile, and possessing a single replicon, which may collectively contribute to its ecological role and adaptability in various environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusHeyndrickxia
SpeciesHeyndrickxia shackletonii
Strainstrain LMG 18435

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Heyndrickxia shackletonii strain LMG 18435
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Heyndrickxia shackletonii strain LMG 18435 Contig32, whole genome

Gene Summary

Adenine Count

1667195 bp

Thymine Count

1664611 bp

Guanine Count

968941 bp

Cytosine Count

963273 bp

Genome Length

5297592 bp

Protein-coding Genes

4681 genes

Non-Coding Genes

171 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive3851 - 5406Not Available
Trna-argNot AvailableNot AvailablePositive4642 - 4718Not Available
Trna-alaNot AvailableNot AvailablePositive4796 - 4871Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive5303 - 5419Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive5735 - 5851Not Available
ctsr family transcriptional regulatorAN964_00050C3W947Positive10496 - 1095717746.0
hypothetical proteinAN964_00055P37569Positive10974 - 1152221044.3
atp--guanido phosphotransferaseAN964_00060C5D3N8Positive11519 - 1259240170.4
clp protease clpxAN964_00065P37571Positive12605 - 1504690777.9
dna repair protein radaAN964_00070Q92F42Positive15481 - 1685449868.4

Displaying genes 81 – 90 of 4852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

231 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 231 metabolites

Health Effects

No health effects information available for this bacterium.