Brevibacillus choshinensis strain DSM 8552

Rodmicroaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Brevibacillus

Description

Brevibacillus choshinensis strain DSM 8552 is a Gram-positive bacterium characterized by its rod shape and presence of flagella. This strain is classified as a microaerophile, indicating that it requires low levels of oxygen for growth, which is essential for its metabolic processes. The natural habitat of Brevibacillus choshinensis DSM 8552 is found within stool samples, suggesting its role in the gut microbiome. The presence of this bacterium in stool can provide insights into the microbial diversity present in the gastrointestinal tract of various organisms, potentially including humans. Genetically, this strain has a single replicon, and its genomic data is accessible under the accession number LJJB00000000.1, which can facilitate further research into its genetic makeup and functional capabilities. The ecological role of Brevibacillus choshinensis in its habitat may be linked to its interactions with other gut microorganisms, possibly contributing to the digestion process or influencing the overall gut health of the host. Understanding the dynamics of such bacteria can enhance our knowledge of the gut microbiome and its influence on health and disease.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusBrevibacillus
SpeciesBrevibacillus choshinensis
Strainstrain DSM 8552

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Brevibacillus choshinensis strain DSM 8552
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatstool
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevibacillus choshinensis strain DSM 8552 Contig23, whole genome

Gene Summary

Adenine Count

1625144 bp

Thymine Count

1611534 bp

Guanine Count

1518457 bp

Cytosine Count

1513247 bp

Genome Length

6279095 bp

Protein-coding Genes

5642 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigmaAN963_23700P10726Positive5008738 - 500952630307.5
polymeraseAN963_23705Not AvailablePositive5009563 - 501097851556.5
hypothetical proteinAN963_23710Not AvailablePositive5011022 - 501136013029.5
hypothetical proteinAN963_23715Not AvailablePositive5011400 - 501191519654.9
dna polymerase iii subunit gamma/tauAN963_23720Not AvailablePositive5011908 - 501252822445.9
30s ribosomal protein s2AN963_23725C0ZF66Positive5012721 - 501342826605.2
elongation factor tsAN963_23730C0ZF65Positive5013553 - 501444032314.4
uridylate kinaseAN963_23735Q5L0K0Positive5014639 - 501536125894.6
ribosome recycling factorAN963_23740C0ZF63Positive5015365 - 501592220892.2
udp pyrophosphate synthaseAN963_23745O31751Positive5015990 - 501676029814.7

Displaying genes 4601 – 4610 of 5812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

316 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da
BASm0000338(1R,4R,5R)-5-hydroxycamphorC10H16O2Chemical structure of (1R,4R,5R)-5-hydroxycamphorNot available
Average168.2328Da
Monoisotopic168.115029756Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 316 metabolites

Health Effects

No health effects information available for this bacterium.