Beta proteobacterium AAP99

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Family

Genus

Description

Beta proteobacterium AAP99 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The organism is cataloged under the accession number LJIA00000000.1, which allows for easy identification and retrieval of its genomic information from databases. The limited number of replicons suggests that AAP99 may possess a relatively simple genetic organization, which could be advantageous for rapid growth and reproduction under specific conditions. This trait is often observed in microorganisms that thrive in niche environments where efficiency in resource utilization is critical. While details regarding its ecological role or specific habitat are not provided, the presence of Beta proteobacteria in various ecosystems, including soil and water, suggests that AAP99 may play a role in nutrient cycling or other ecological processes. This group of bacteria is often associated with the degradation of organic materials and the biogeochemical cycling of elements, such as nitrogen. In summary, the single replicon of Beta proteobacterium AAP99, as denoted by its accession LJIA00000000.1, signifies a potential for efficient metabolic processes, which may enhance its ecological versatility and role in the environments it inhabits. Understanding these traits can provide insights into the organism's contributions to its ecosystem and the broader implications for microbial community dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Beta proteobacterium AAP99 AAP99_Contigs_31, whole genome shotgun

Gene Summary

Adenine Count

667292 bp

Thymine Count

667326 bp

Guanine Count

1265407 bp

Cytosine Count

1258492 bp

Genome Length

3858517 bp

Protein-coding Genes

3144 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinIP84_02665Not AvailablePositive551492 - 55199218638.6
hypothetical proteinIP84_02670Not AvailablePositive552006 - 55294133755.2
hypothetical proteinIP84_02675Not AvailablePositive553007 - 55348316502.2
nitrate abc transporter substrate-binding proteinIP84_02680Not AvailableNegative553625 - 55463837322.9
hypothetical proteinIP84_02685Not AvailableNegative554656 - 55497611562.5
methylglyoxal synthaseIP84_02690B3R3G1Negative555072 - 55543712872.8
hypothetical proteinIP84_02695O53590Positive555653 - 55628222634.6
hypothetical proteinIP84_02700Not AvailablePositive556279 - 55762843724.1
16s rrna methyltransferaseIP84_02705Q9JXE3Negative557809 - 55873532166.5
hypothetical proteinIP84_02710Not AvailablePositive559249 - 5594827823.28

Displaying genes 501 – 510 of 3214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

210 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 210 metabolites

Health Effects

No health effects information available for this bacterium.