Alpha proteobacterium AAP81b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

Alpha proteobacterium AAP81b is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism's genetic information is cataloged under the accession number LJHX00000000.1, which provides a reference for researchers interested in its genomic characteristics. The classification of AAP81b within the Alpha proteobacteria suggests it may share certain metabolic and ecological traits common to this group, which is known for its diversity and ecological significance. Alpha proteobacteria are often involved in various biogeochemical cycles and play critical roles in nutrient cycling in aquatic and terrestrial ecosystems. The presence of a single replicon might imply a simplified regulatory network and could influence the organism's growth rate and response to environmental stressors. This trait can be advantageous in fluctuating conditions, allowing AAP81b to efficiently utilize resources. Understanding the genomic organization of AAP81b could provide insights into its ecological roles, particularly in environments where it may serve as a key player in nutrient dynamics or microbial community interactions. Overall, the streamlined genomic structure of Alpha proteobacterium AAP81b may enhance its adaptability, potentially allowing it to occupy specific ecological niches and contribute to the broader microbial community dynamics. Further research into its ecological roles may reveal important functions within its habitat.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium AAP81b


Gene Summary

Adenine Count

544210 bp

Thymine Count

542777 bp

Guanine Count

1176109 bp

Cytosine Count

1186947 bp

Genome Length

3450043 bp

Protein-coding Genes

3055 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinIP88_00005Not AvailablePositive1 - 2688867.37
hypothetical proteinIP88_00010Not AvailableNegative271 - 67514260.1
16s ribosomal rnaNot AvailableNot AvailablePositive1801 - 3291Not Available
methylmalonyl-coa carboxyltransferaseIP88_00015I3R7F1Negative695 - 224255955.0
hypothetical proteinIP88_00025Not AvailablePositive3475 - 382511673.2
23s ribosomal rnaNot AvailableNot AvailablePositive3876 - 6684Not Available
hypothetical proteinIP88_00030Not AvailablePositive3886 - 429614950.4
5s ribosomal rnaNot AvailableNot AvailablePositive6767 - 6881Not Available
lysine decarboxylaseIP88_00050Not AvailableNegative9090 - 994131327.5
enoyl-coa hydrataseIP88_00055C5NN19Positive10021 - 1080026683.9

Displaying genes 1 – 10 of 3107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

268 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000468D-galactono-1,5-lactoneC6H10O6Chemical structure of D-galactono-1,5-lactoneNot available
Average178.14Da
Monoisotopic178.047738052Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 268 metabolites

Health Effects

No health effects information available for this bacterium.