Actinobacteria bacterium OK074

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Family

Genus

Description

Actinobacteria bacterium OK074 is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability and survival in various environments. The genomic data for this bacterium is accessible under the accession number LJCV00000000.1, providing a reference point for further studies and comparisons with other Actinobacteria. Actinobacteria is a phylum known for its diverse metabolic capabilities and role in nutrient cycling, particularly in soil ecosystems. These bacteria are often involved in the decomposition of organic matter, contributing significantly to soil health and fertility. Their ability to produce a wide array of bioactive compounds has implications for pharmaceuticals, agriculture, and biotechnology. The presence of a single replicon in Actinobacteria bacterium OK074 may indicate a specific evolutionary strategy, potentially allowing for efficient replication and resource utilization. This trait could be advantageous in environments where rapid growth and adaptation are essential for survival. In summary, the genomic structure of Actinobacteria bacterium OK074, as evidenced by its single replicon and accessible genomic data, highlights its potential ecological role in nutrient cycling and its importance in biotechnological applications. Further research into this bacterium may reveal more about its capabilities and contributions to its ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinobacteria bacterium OK074 ctg9, whole genome shotgun

Gene Summary

Adenine Count

1526858 bp

Thymine Count

1529469 bp

Guanine Count

3800052 bp

Cytosine Count

3811728 bp

Genome Length

10668107 bp

Protein-coding Genes

9135 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhodanese-like proteinOK074_5433Not AvailablePositive8853694 - 885406212854.6
protein of unknown function duf81OK074_5434Q9PFB4Positive8854059 - 885482324559.6
metal sensitive transcriptional repressorOK074_5435Not AvailableNegative8854881 - 885520411384.8
rhodanese-like proteinOK074_5436Not AvailablePositive8855244 - 885581019384.2
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolaseOK074_5437Not AvailableNegative8855841 - 885655424300.2
2-dehydro-3-deoxygluconokinaseOK074_5438Not AvailableNegative8856585 - 885759434980.4
hypothetical proteinOK074_5439Not AvailablePositive8857849 - 885909345060.5
hypothetical proteinOK074_5440Not AvailablePositive8859097 - 886109170323.6
hypothetical proteinOK074_5441Not AvailablePositive8861088 - 886240749182.1
von willebrand factor type aOK074_5442Not AvailablePositive8862404 - 886441673841.6

Displaying genes 7651 – 7660 of 9219 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

586 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 586 metabolites

Health Effects

No health effects information available for this bacterium.