Rothia kristinae strain RUTW2-3

Coccusaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Rothia

Description

Rothia kristinae strain RUTW2-3 is a Gram-positive coccus that inhabits the skin of Homo sapiens. This strain is characterized by its aerobic oxygen requirement, which indicates it thrives in environments with sufficient oxygen. Notably, Rothia kristinae strain RUTW2-3 possesses flagella, suggesting it has the potential for motility, a trait that could influence its ecological interactions on the skin surface. The strain has a single replicon, indicating a relatively simple genetic organization compared to organisms with multiple replicons. Its accession number is LJBJ00000000.2, which allows for precise identification and access to its genetic information for further research. The presence of Rothia kristinae on human skin highlights its potential role in the skin microbiome, contributing to the complex interplay of microbial communities in maintaining skin health. Understanding the characteristics and behavior of this strain can provide insights into its ecological role, particularly in relation to skin health and disease. By studying such microorganisms, researchers can further unravel the dynamics of the skin microbiome and its implications for human health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusRothia
SpeciesRothia kristinae
Strainstrain RUTW2-3

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rothia kristinae strain RUTW2-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatskin
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rothia kristinae strain RUTW2-3 contig00047, whole genome shotgun

Gene Summary

Adenine Count

331653 bp

Thymine Count

331622 bp

Guanine Count

850329 bp

Cytosine Count

842526 bp

Genome Length

2356130 bp

Protein-coding Genes

1872 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein cpafAN277_0204485Not AvailablePositive1025046 - 102634146668.4
type ii secretion system protein fAN277_0204490Not AvailablePositive1026338 - 102719530972.2
hypothetical proteinAN277_0204495Not AvailablePositive1027207 - 102814233124.3
hypothetical proteinAN277_0204500Not AvailablePositive1028195 - 10284167834.04
pilus assembly protein tadeAN277_0204505Not AvailablePositive1028545 - 102888912190.8
hypothetical proteinAN277_0204510Not AvailablePositive1028873 - 102930715187.0
hypothetical proteinAN277_0204515Not AvailablePositive1029373 - 102982515371.6
peptide chain release factor 2AN277_0204520B8HBH8Positive1030050 - 103116841202.2
ssra-binding proteinAN277_0204525B8HBH4Positive1031178 - 103167819118.9
Tmrna,resume consensus sequence (at 88): aataagtgccaaatctgaNot AvailableNot AvailablePositive1031783 - 1032154Not Available

Displaying genes 841 – 850 of 1927 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

188 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 188 metabolites

Health Effects

No health effects information available for this bacterium.