Candidatus Erwinia dacicola strain Oroville

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Candidatus Erwinia dacicola strain Oroville is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This strain is notable for having a single replicon, indicating a streamlined genetic architecture. The genomic sequence of this strain is accessible under the accession number LJAM00000000.2. The rod shape and flagellar presence may confer advantages in its ecological niche, potentially facilitating movement towards nutrients or away from harmful substances in its environment. As a member of the Erwinia genus, Candidatus Erwinia dacicola is often associated with plant hosts, where it may play a role in interactions that could be beneficial or pathogenic. The single replicon may also imply a simpler and more efficient replication process, which can be advantageous in various environmental conditions. Understanding the characteristics of Candidatus Erwinia dacicola strain Oroville can provide insights into its ecological role, particularly in relation to its interactions with plant systems. The motility afforded by flagella could influence its distribution and colonization patterns, impacting plant health and ecosystem dynamics. Further studies on this strain may elucidate its specific functions and interactions within its ecological niche, contributing to a broader understanding of microbial roles in plant-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesCandidatus Erwinia dacicola
Strainstrain Oroville

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Candidatus Erwinia dacicola strain Oroville
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Erwinia dacicola strain Oroville edac.contig.1030_1,

Gene Summary

Adenine Count

674588 bp

Thymine Count

680180 bp

Guanine Count

749447 bp

Cytosine Count

753809 bp

Genome Length

2858157 bp

Protein-coding Genes

3741 genes

Non-Coding Genes

341 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinACZ87_03140Not AvailablePositive2430910 - 24310163930.87
phage regulatory cii family proteinACZ87_03141Not AvailableNegative2431017 - 24312789078.02
bacterial regulatory, fis family proteinACZ87_03142Not AvailableNegative2431304 - 24314897016.29
bacteriophage ci repressor helix-turn-helix domain proteinACZ87_03143Not AvailablePositive2431861 - 243244521238.6
phage domain proteinACZ87_03144Not AvailablePositive2432454 - 24325915276.48
nicotinate phosphoribosyltransferaseACZ87_03145Not AvailablePositive2432884 - 243410446131.4
chain length determinant family proteinACZ87_03146Not AvailableNegative2434376 - 243553644199.4
hypothetical proteinACZ87_03147Not AvailableNegative2435691 - 24358626033.32
phosphoribosylglycinamide formyltransferase 2 domain proteinACZ87_03148Not AvailablePositive2436124 - 24363427641.45
d-ala d-ala ligase family proteinACZ87_03149Not AvailablePositive2436358 - 243730233586.3

Displaying genes 3141 – 3150 of 4082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.