Candidatus Erwinia dacicola strain Oroville

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Candidatus Erwinia dacicola strain Oroville is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This strain is notable for having a single replicon, indicating a streamlined genetic architecture. The genomic sequence of this strain is accessible under the accession number LJAM00000000.2. The rod shape and flagellar presence may confer advantages in its ecological niche, potentially facilitating movement towards nutrients or away from harmful substances in its environment. As a member of the Erwinia genus, Candidatus Erwinia dacicola is often associated with plant hosts, where it may play a role in interactions that could be beneficial or pathogenic. The single replicon may also imply a simpler and more efficient replication process, which can be advantageous in various environmental conditions. Understanding the characteristics of Candidatus Erwinia dacicola strain Oroville can provide insights into its ecological role, particularly in relation to its interactions with plant systems. The motility afforded by flagella could influence its distribution and colonization patterns, impacting plant health and ecosystem dynamics. Further studies on this strain may elucidate its specific functions and interactions within its ecological niche, contributing to a broader understanding of microbial roles in plant-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesCandidatus Erwinia dacicola
Strainstrain Oroville

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Candidatus Erwinia dacicola strain Oroville
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Erwinia dacicola strain Oroville edac.contig.1030_1,

Gene Summary

Adenine Count

674588 bp

Thymine Count

680180 bp

Guanine Count

749447 bp

Cytosine Count

753809 bp

Genome Length

2858157 bp

Protein-coding Genes

3741 genes

Non-Coding Genes

341 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
intracellular septation protein aACZ87_02277Not AvailablePositive1848489 - 184902820741.2
thioesterase superfamily proteinACZ87_02278Not AvailablePositive1849098 - 184939110433.9
putative acyl-coa thioester hydrolaseACZ87_02279Not AvailablePositive1849409 - 18495284281.07
tonb family c-terminal domain proteinACZ87_02280Not AvailableNegative1849548 - 185020724043.6
protein yciiACZ87_02281Not AvailablePositive1850411 - 185070710694.7
putative transposaseACZ87_02282Not AvailablePositive1851184 - 18513154616.67
abc transporter family proteinACZ87_02283Not AvailablePositive1851493 - 185222126740.2
lysine-arginine-ornithine-binding periplasmic family proteinACZ87_02284Not AvailablePositive1852237 - 185296826852.2
amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain proteinACZ87_02285Not AvailablePositive1852972 - 185368826452.8
amino abc transporter, permease, 3-tm region, his/glu/gln/arg/opine family domain proteinACZ87_02286Not AvailablePositive1853688 - 185435624602.9

Displaying genes 2281 – 2290 of 4082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.