Candidatus Erwinia dacicola strain Oroville

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Candidatus Erwinia dacicola strain Oroville is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This strain is notable for having a single replicon, indicating a streamlined genetic architecture. The genomic sequence of this strain is accessible under the accession number LJAM00000000.2. The rod shape and flagellar presence may confer advantages in its ecological niche, potentially facilitating movement towards nutrients or away from harmful substances in its environment. As a member of the Erwinia genus, Candidatus Erwinia dacicola is often associated with plant hosts, where it may play a role in interactions that could be beneficial or pathogenic. The single replicon may also imply a simpler and more efficient replication process, which can be advantageous in various environmental conditions. Understanding the characteristics of Candidatus Erwinia dacicola strain Oroville can provide insights into its ecological role, particularly in relation to its interactions with plant systems. The motility afforded by flagella could influence its distribution and colonization patterns, impacting plant health and ecosystem dynamics. Further studies on this strain may elucidate its specific functions and interactions within its ecological niche, contributing to a broader understanding of microbial roles in plant-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesCandidatus Erwinia dacicola
Strainstrain Oroville

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Candidatus Erwinia dacicola strain Oroville
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Erwinia dacicola strain Oroville edac.contig.1030_1,

Gene Summary

Adenine Count

674588 bp

Thymine Count

680180 bp

Guanine Count

749447 bp

Cytosine Count

753809 bp

Genome Length

2858157 bp

Protein-coding Genes

3741 genes

Non-Coding Genes

341 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacterial regulatory helix-turn-helix, lysr family proteinACZ87_02247Not AvailableNegative1824884 - 18250305250.46
integrase core domain proteinACZ87_02248Not AvailableNegative1825137 - 18253176656.77
alpha/beta hydrolase fold family proteinACZ87_02249Not AvailableNegative1825368 - 182580516761.0
putative homoserine/homoserine lactone efflux proteinACZ87_02250Not AvailablePositive1825930 - 18260614641.6
lyse type translocator family proteinACZ87_02251Not AvailablePositive1826033 - 182638612858.3
atp-dependent dna helicase recqACZ87_02252Not AvailableNegative1826470 - 182830868673.2
phospholipase a1 family proteinACZ87_02253Not AvailableNegative1828378 - 182902224651.6
glutamine-fructose-6-phosphate transaminaseACZ87_02254Not AvailableNegative1829216 - 183104866648.1
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseACZ87_02255Not AvailableNegative1831218 - 183258848821.0
na+ symporter family proteinACZ87_02256Not AvailablePositive1832927 - 183436352399.7

Displaying genes 2251 – 2260 of 4082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.