Loktanella sp. 3ANDIMAR09 PM07_034

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Loktanella

Description

Loktanella sp. 3ANDIMAR09 PM07_034 is characterized by having a single replicon, indicating a simple genomic organization. The organism is cataloged under the accession number LJAK00000000.1, which provides a reference for its genetic material in nucleotide databases. The limited information available on Loktanella sp. 3ANDIMAR09 PM07_034 suggests that it may be part of a broader ecological niche, likely involving marine environments, as the genus Loktanella is commonly associated with marine habitats. Members of this genus are known for their roles in various biogeochemical processes, including the breakdown of organic matter and interactions with other microorganisms. Understanding the genomic organization of Loktanella sp. 3ANDIMAR09 PM07_034, specifically its single replicon structure, may offer insights into its adaptability and evolutionary strategies within its ecological niche. This trait could be indicative of a streamlined metabolic capacity, potentially allowing for efficient resource utilization in its environment. Overall, the exploration of Loktanella sp. 3ANDIMAR09 PM07_034 contributes to our understanding of microbial diversity and functionality in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLoktanella
SpeciesLoktanella sp. 3ANDIMAR09
StrainPM07_034

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella sp. 3ANDIMAR09 PM07_034, whole genome shotgun sequence.

Gene Summary

Adenine Count

699213 bp

Thymine Count

700358 bp

Guanine Count

1136858 bp

Cytosine Count

1141861 bp

Genome Length

3678290 bp

Protein-coding Genes

3379 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine abc transporter substrate-binding proteinAN189_02425Not AvailablePositive482396 - 48337034252.9
abc transporter permeaseAN189_02430Not AvailablePositive483346 - 48486953016.9
thiamine abc transporter atp-binding proteinAN189_02435Not AvailablePositive484856 - 48554823990.1
cytochrome cAN189_02440Not AvailableNegative485600 - 48647831768.3
cytochrome bAN189_02445Not AvailableNegative486493 - 48783650584.4
ubiquinol-cytochrome c reductaseAN189_02450Not AvailableNegative487849 - 48843020383.8
glutathione s-transferaseAN189_02455Not AvailableNegative488667 - 48927222029.3
2-methylthioadenine synthaseAN189_02460Not AvailableNegative489330 - 49058645576.6
diaminopimelate epimeraseAN189_02465Not AvailableNegative490579 - 49137628360.5
Trna-lysNot AvailableNot AvailablePositive491476 - 491551Not Available

Displaying genes 701 – 710 of 3579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.