Loktanella sp. 3ANDIMAR09 PM07_034

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Loktanella

Description

Loktanella sp. 3ANDIMAR09 PM07_034 is characterized by having a single replicon, indicating a simple genomic organization. The organism is cataloged under the accession number LJAK00000000.1, which provides a reference for its genetic material in nucleotide databases. The limited information available on Loktanella sp. 3ANDIMAR09 PM07_034 suggests that it may be part of a broader ecological niche, likely involving marine environments, as the genus Loktanella is commonly associated with marine habitats. Members of this genus are known for their roles in various biogeochemical processes, including the breakdown of organic matter and interactions with other microorganisms. Understanding the genomic organization of Loktanella sp. 3ANDIMAR09 PM07_034, specifically its single replicon structure, may offer insights into its adaptability and evolutionary strategies within its ecological niche. This trait could be indicative of a streamlined metabolic capacity, potentially allowing for efficient resource utilization in its environment. Overall, the exploration of Loktanella sp. 3ANDIMAR09 PM07_034 contributes to our understanding of microbial diversity and functionality in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusLoktanella
SpeciesLoktanella sp. 3ANDIMAR09
StrainPM07_034

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Loktanella sp. 3ANDIMAR09 PM07_034, whole genome shotgun sequence.

Gene Summary

Adenine Count

699213 bp

Thymine Count

700358 bp

Guanine Count

1136858 bp

Cytosine Count

1141861 bp

Genome Length

3678290 bp

Protein-coding Genes

3379 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent oxidoreductaseAN189_10270Not AvailablePositive2031142 - 203180723697.0
rhat family transporterAN189_10275Not AvailablePositive2031811 - 203267730613.1
dihydrodipicolinate synthaseAN189_10290Not AvailablePositive2036131 - 203700329921.3
hypothetical proteinAN189_10295Not AvailableNegative2037054 - 203823244404.3
ssra-binding proteinAN189_10300Not AvailablePositive2038319 - 203879218330.1
carboxynorspermidine decarboxylaseAN189_10305Not AvailablePositive2038930 - 204002440504.0
saccharopine dehydrogenaseAN189_10310Not AvailablePositive2040052 - 204129344553.6
3-mercaptopyruvate sulfurtransferaseAN189_10315Not AvailablePositive2041417 - 204228331221.1
aromatic amino acid aminotransferaseAN189_10320Not AvailablePositive2042294 - 204347842896.0
malyl-coa lyaseAN189_10325Not AvailablePositive2043666 - 204462534167.7

Displaying genes 2131 – 2140 of 3579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.