Helicobacter pylori strain 22

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 22 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. It is notably found in host-associated habitats and exhibits a single-cell arrangement. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. It possesses one replicon and is surrounded by two membranes, indicative of its Gram-negative classification. H. pylori strain 22 is recognized for its pathogenicity in humans and is associated with a range of gastrointestinal diseases. These include chronic gastric inflammation, peptic ulcer disease, gastric cancer, and various forms of gastric ulcers, among others. The bacterium is linked to serious health effects such as mucosa-associated lymphoid tissue lymphoma (MALT lymphoma), chronic gastritis, and dyspepsia, highlighting its role in significant gastrointestinal disorders. In terms of its ecological relationships, H. pylori strain 22 has a diverse range of hosts, including Homo sapiens, Gallus gallus (domestic chicken), various Aves (birds), Primates, Mammalia, Rodentia, Cricetinae (hamsters), and even Amoeba. This broad host range suggests that the bacterium has evolved to establish and maintain its presence in various biological systems, potentially influencing the health of its hosts through its pathogenic effects. The intricate relationship between H. pylori and its hosts underscores the importance of understanding microbial interactions in both health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 22

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 22 Contig73, whole genome shotgun

Gene Summary

Adenine Count

504561 bp

Thymine Count

504420 bp

Guanine Count

316814 bp

Cytosine Count

324219 bp

Genome Length

1650014 bp

Protein-coding Genes

1491 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-metNot AvailableNot AvailablePositive840806 - 840882Not Available
pseudouridine synthaseAM498_04195Q9ZL98Positive843345 - 84432837770.5
fibronectinAM498_04200Not AvailablePositive844291 - 84553847556.5
trna (guanine-n7)-methyltransferaseAM498_04205Q1CTC3Positive845549 - 84673045384.4
abc transporter atp-binding proteinAM498_04210O05779Positive846727 - 84739825403.8
cell division protein ftsxAM498_04215Not AvailablePositive847385 - 84819130799.6
peptidase m23AM498_04220Not AvailablePositive848184 - 84938646018.1
flagellar protein flagAM498_04225Not AvailablePositive849479 - 84983813407.1
flagellar capping proteinAM498_04230P96786Positive849855 - 85191274330.9
flagellar biosynthesis protein flisAM498_04235P0DPD3Positive851953 - 85233314543.3

Displaying genes 841 – 850 of 1555 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

93 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 93 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total