Streptomyces sp. CB02488

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. CB02488 is a notable bacterium characterized by the presence of flagella, which suggests a capability for motility. This trait may facilitate its ability to navigate through various environments, potentially enhancing its ecological adaptability and interactions with other microorganisms. The genetic makeup of Streptomyces sp. CB02488 is organized into a single replicon, indicating a streamlined genomic structure that may contribute to efficient replication and gene expression. This can be particularly advantageous in fluctuating environmental conditions, allowing the organism to respond swiftly to changes. The strain is cataloged under the accession number LIVO00000000.1, which serves as a reference for further genomic and taxonomic studies. The availability of this accession aids researchers in accessing specific genetic information that can elucidate the metabolic pathways and ecological roles of this bacterium. In terms of ecological insight, the motility conferred by its flagella could play a significant role in the organism's ability to colonize diverse habitats, compete for resources, and establish symbiotic or antagonistic relationships with other microbial communities. Such interactions are crucial for nutrient cycling and the overall health of ecosystems where Streptomyces sp. CB02488 may reside.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. CB02488
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. CB02488
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. CB02488 scaffold33, whole genome shotgun

Gene Summary

Adenine Count

1290084 bp

Thymine Count

1288611 bp

Guanine Count

3158122 bp

Cytosine Count

3155439 bp

Genome Length

8892300 bp

Protein-coding Genes

7292 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malate dehydrogenaseAMK09_00685Not AvailableNegative136070 - 13706234469.9
hypothetical proteinAMK09_00690Not AvailableNegative137281 - 13842038663.8
Ncrna_class:otherNot AvailableNot AvailablePositive138452 - 138526Not Available
hypothetical proteinAMK09_00695Not AvailableNegative138937 - 13952119459.3
methenyltetrahydrofolate cyclohydrolaseAMK09_00700Not AvailableNegative139542 - 14040830146.3
rdd family proteinAMK09_00705Not AvailablePositive140638 - 14141126819.2
Ncrna_class:otherNot AvailableNot AvailablePositive143012 - 143086Not Available
phosphoribosylaminoimidazolecarboxamide formyltransferaseAMK09_00710Not AvailableNegative141523 - 14307654439.1
phosphoribosylglycinamide formyltransferaseAMK09_00715Not AvailableNegative143063 - 14371922773.1
hypothetical proteinAMK09_00720Not AvailablePositive144061 - 14505933773.9

Displaying genes 161 – 170 of 7392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

166 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 166 metabolites

Health Effects

No health effects information available for this bacterium.