Escherichia coli strain 304

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 304 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It typically exists in pairs or as single cells and possesses flagella, which confer mobility. This strain is mesophilic, with an optimal growth temperature of 37 degrees Celsius, and it has a biotic relationship characterized as free-living. E. coli strain 304 is associated with a wide range of hosts, including Homo sapiens, various domesticated animals such as Gallus gallus (chicken) and Bos taurus (cattle), as well as plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). The strain is known for its significant health impacts, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). Its pathogenicity underscores the strain's role in both enteric and extraintestinal diseases, contributing to various health complications such as diarrhea, peritonitis, and even complications in pregnancy. The ecological insight from the diverse host range and pathogenic effects of E. coli strain 304 suggests its adaptability and potential for transmission across species, including humans and livestock. This adaptability highlights the importance of monitoring this strain in both clinical and agricultural settings, as its presence can significantly influence public health and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 304

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 304
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 304


Gene Summary

Adenine Count

1356525 bp

Thymine Count

1355119 bp

Guanine Count

1389547 bp

Cytosine Count

1380128 bp

Genome Length

5481319 bp

Protein-coding Genes

5160 genes

Non-Coding Genes

375 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive813548 - 813559Not Available
Putative integraseAM270_04065Not AvailableNegative826559 - 82783948341.3
Bacteriophage excisionaseAM270_04070Not AvailableNegative827875 - 8281269818.89
Exodeoxyribonuclease viiiAM270_04075P15032Negative828197 - 83065391280.6
hypothetical proteinAM270_04080P29010Negative830731 - 8309347209.79
cell division inhibition protein dicbAM270_04085P09557Negative830931 - 8311197130.68
hypothetical proteinAM270_04095Not AvailableNegative831811 - 83221516100.2
hypothetical proteinAM270_04105Not AvailableNegative832339 - 83297424249.7
hypothetical proteinAM270_04110P21418Negative832999 - 8332057671.21
repressorAM270_04115P76062Negative833531 - 83400717612.0

Displaying genes 1 – 10 of 5535 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

319 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 319 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total