Escherichia coli strain 304

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 304 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It typically exists in pairs or as single cells and possesses flagella, which confer mobility. This strain is mesophilic, with an optimal growth temperature of 37 degrees Celsius, and it has a biotic relationship characterized as free-living. E. coli strain 304 is associated with a wide range of hosts, including Homo sapiens, various domesticated animals such as Gallus gallus (chicken) and Bos taurus (cattle), as well as plants like Solanum lycopersicum (tomato) and Brassica oleracea var. italica (broccoli). The strain is known for its significant health impacts, particularly in humans, where it is linked to urinary tract infections (UTIs), gastrointestinal infections, and severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). Its pathogenicity underscores the strain's role in both enteric and extraintestinal diseases, contributing to various health complications such as diarrhea, peritonitis, and even complications in pregnancy. The ecological insight from the diverse host range and pathogenic effects of E. coli strain 304 suggests its adaptability and potential for transmission across species, including humans and livestock. This adaptability highlights the importance of monitoring this strain in both clinical and agricultural settings, as its presence can significantly influence public health and food safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 304

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 304
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 304 contig000250, whole genome shotgun

Gene Summary

Adenine Count

1356525 bp

Thymine Count

1355119 bp

Guanine Count

1389547 bp

Cytosine Count

1380128 bp

Genome Length

5481319 bp

Protein-coding Genes

5160 genes

Non-Coding Genes

375 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kinase inhibitorAM270_20795P12994Negative4180934 - 418141017086.0
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseAM270_20800P12995Negative4181469 - 418270144995.7
biotin synthaseAM270_20805A7ZJI4Positive4182845 - 418388538650.3
8-amino-7-oxononanoate synthaseAM270_20810B7LC58Positive4183882 - 418503641715.9
biotin biosynthesis protein biocAM270_20815P12999Positive4185023 - 418577828210.8
dethiobiotin synthetaseAM270_20820P13000Positive4185771 - 418644824140.9
excinuclease abc subunit bAM270_20825A7ZJI8Positive4187027 - 418904876230.6
hypothetical proteinAM270_20830P75767Negative4189240 - 419014832790.0
hypothetical proteinAM270_20835Not AvailableNegative4190391 - 41905465565.96
molybdenum cofactor biosynthesis protein aAM270_20840Q3Z403Positive4190545 - 419153437334.6

Displaying genes 4291 – 4300 of 5535 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4786 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4786 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total