Hapalosiphon sp. MRB220

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Hapalosiphonaceae

Genus

Hapalosiphon

Description

Hapalosiphon sp. MRB220 is characterized by having a single replicon, which indicates a relatively simple genomic organization. This trait is significant as it can influence the organism's genetic stability and replication processes. The genomic data for Hapalosiphon sp. MRB220 is accessible under the accession number LIRN00000000.1, which provides a reference point for further studies and comparisons with other strains or species. The presence of a single replicon suggests that Hapalosiphon sp. MRB220 may exhibit streamlined genetic features, potentially allowing for efficient resource use and adaptation to its ecological niche. Organisms with simplified genomic structures can often thrive in specific environments, where they may have reduced competition or specific resource availability. In a broader biological context, the traits of Hapalosiphon sp. MRB220 may offer insights into its ecological roles, particularly in microbial communities. Such organisms can play essential roles in nutrient cycling, contributing to the overall health and dynamics of their ecosystems. Understanding the genomic characteristics of Hapalosiphon sp. MRB220 can provide valuable information for microbiologists studying the diversity and functionality of microbial life in various environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyHapalosiphonaceae
GenusHapalosiphon
SpeciesHapalosiphon sp. MRB220
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hapalosiphon sp. MRB220 contig_99, whole genome shotgun sequence.

Gene Summary

Adenine Count

2220403 bp

Thymine Count

2218741 bp

Guanine Count

1493175 bp

Cytosine Count

1492508 bp

Genome Length

7429720 bp

Protein-coding Genes

5845 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMR41_04770Not AvailableNegative1173693 - 11739118085.41
chloride channel proteinAMR41_04775Q87WD2Positive1174149 - 117544146235.9
hypothetical proteinAMR41_04780Not AvailablePositive1175748 - 117703147638.3
trmb family transcriptional regulatorAMR41_04785P67732Positive1177520 - 117785812532.2
polyketide synthaseAMR41_04790Q9R9J1Positive1178755 - 118017352645.4
amino acid abc transporter permeaseAMR41_04795O31462Positive1180332 - 118177151869.9
had family hydrolaseAMR41_04800Not AvailablePositive1181947 - 118269926710.3
amino acid abc transporter permeaseAMR41_04805O07576Positive1183351 - 118479651932.7
chemotaxis protein cheyAMR41_04810P39048Positive1185543 - 118661941332.7
chemotaxis protein cheyAMR41_04815Not AvailablePositive1186688 - 118706513885.0

Displaying genes 911 – 920 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

252 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 252 metabolites

Health Effects

No health effects information available for this bacterium.