Paenibacillus riograndensis strain CAS34

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus riograndensis strain CAS34 is a Gram-positive, facultative anaerobic bacterium characterized by its rod shape. It thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range. Notably, this strain is capable of sporulation, which allows it to form spores under adverse environmental conditions, thereby enhancing its survival. The strain is classified with a single replicon, indicating a simpler genomic structure compared to strains with multiple replicons. Its accession number is LIRB00000000.1, which can be used for further reference and research purposes. The ability of Paenibacillus riograndensis strain CAS34 to grow under both aerobic and anaerobic conditions, combined with its mesophilic nature, suggests a versatile ecological role. This adaptability enhances its potential to inhabit various environments, including soil and plant-associated niches. The spore-forming capability could also play a crucial role in its survival in fluctuating conditions, making it an important organism in microbial communities, particularly in nutrient cycling and soil health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus riograndensis
Strainstrain CAS34

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus riograndensis strain CAS34 contig_1, whole genome

Gene Summary

Adenine Count

1815346 bp

Thymine Count

1814287 bp

Guanine Count

1880714 bp

Cytosine Count

1871151 bp

Genome Length

7381498 bp

Protein-coding Genes

5939 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMQ84_28100Not AvailableNegative6428409 - 642954842031.9
hypothetical proteinAMQ84_28105Not AvailableNegative6429763 - 643007411703.3
hypothetical proteinAMQ84_28110Not AvailableNegative6430092 - 643066722635.3
polyketide cyclaseAMQ84_28115Not AvailableNegative6430917 - 643135116255.8
hypothetical proteinAMQ84_28120Not AvailableNegative6431449 - 643205122632.2
threonine--trna ligaseAMQ84_28125P18256Negative6432204 - 643413273173.6
5'-nucleotidaseAMQ84_28130Q9I767Negative6434596 - 643528225237.0
histidine kinaseAMQ84_28135Not AvailablePositive6435452 - 643734170763.3
glycosyl transferase family 1AMQ84_28140O31853Positive6437493 - 643868643986.8
peptidase m16AMQ84_28145Q46205Negative6438717 - 6441647111031.0

Displaying genes 5351 – 5360 of 6062 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

234 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da

Displaying 1–10 of 234 metabolites

Health Effects

No health effects information available for this bacterium.