Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptigoglycan-binding protein lysm | AL065_27835 | Not Available | Positive | 4969072 - 4969938 | 30358.2 |
| rna polymerase sigma factor rpos | AL065_27840 | Not Available | Positive | 4970042 - 4971049 | 38163.6 |
| ferredoxin | AL065_27845 | Not Available | Negative | 4971565 - 4971888 | 11955.1 |
| dna mismatch repair protein muts | AL065_27850 | Not Available | Negative | 4972148 - 4974727 | 95437.8 |
| damage-inducible protein cina | AL065_27855 | Not Available | Positive | 4975186 - 4975701 | 17896.1 |
| dna recombination/repair protein reca | AL065_27860 | Not Available | Positive | 4975795 - 4976859 | 37702.6 |
| recombinase recx | AL065_27865 | Not Available | Positive | 4976865 - 4977332 | 17828.4 |
| cytochrome d ubiquinol oxidase subunit ii | AL065_27870 | Not Available | Negative | 4977337 - 4978458 | 42407.6 |
| hypothetical protein | AL065_27875 | Not Available | Negative | 4978652 - 4979068 | 15353.6 |
| hypothetical protein | AL065_27880 | Not Available | Positive | 4979347 - 4980057 | 26941.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







