Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | AL065_03855 | Not Available | Positive | 4770032 - 4770721 | 24336.2 |
| 8-oxoguanine deaminase | AL065_03860 | Not Available | Positive | 4770845 - 4772200 | 48790.9 |
| calcium:proton antiporter | AL065_03865 | Not Available | Negative | 4772312 - 4773409 | 38961.8 |
| iron-dicitrate transporter substrate-binding subunit | AL065_03870 | Not Available | Positive | 4773676 - 4774596 | 32959.7 |
| abc transporter permease | AL065_26925 | Not Available | Negative | 4775620 - 4776396 | 28787.2 |
| type iii effector hrpk | AL065_27015 | Not Available | Negative | 4788596 - 4790905 | 80069.4 |
| rna polymerase subunit sigma | AL065_27020 | Not Available | Negative | 4790979 - 4791533 | 21181.3 |
| type iii secretion protein hrpj | AL065_27025 | Not Available | Positive | 4791777 - 4792883 | 40576.3 |
| type iii secretion protein hrpi | AL065_27030 | Not Available | Positive | 4792880 - 4794967 | 76622.0 |
| type iii secretion protein | AL065_27035 | Not Available | Positive | 4795001 - 4795975 | 35346.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







