Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AL065_23170 | Not Available | Positive | 3906947 - 3907573 | 22473.0 |
| lysr family transcriptional regulator | AL065_23180 | Not Available | Positive | 3909597 - 3910472 | 32020.6 |
| glyoxalase | AL065_23185 | Not Available | Negative | 3910532 - 3910957 | 15925.8 |
| rna polymerase subunit sigma | AL065_23190 | Not Available | Positive | 3912696 - 3913208 | 20047.1 |
| transcriptional regulator | AL065_23195 | Not Available | Positive | 3913208 - 3913870 | 24105.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AL065_23200 | Not Available | Negative | 3913892 - 3915148 | 43693.4 |
| diguanylate cyclase | AL065_23205 | Not Available | Negative | 3915245 - 3915727 | 18410.0 |
| chemotaxis protein chec | AL065_23210 | Not Available | Negative | 3915731 - 3916735 | 35953.9 |
| antitoxin | AL065_23215 | Not Available | Positive | 3917003 - 3917452 | 16848.1 |
| hypothetical protein | AL065_23220 | Not Available | Positive | 3917449 - 3917910 | 16823.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







