Pseudomonas amygdali pv. ulmi strain CFBP 1407

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain CFBP 1407 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain is of particular interest due to its pathogenic effects on various plant hosts, including Olea europaea (olive), Mallotus japonicus, Loropetalum chinense, and Prunus dulcis (almond). The bacterium has a single replicon, which may influence its genetic stability and adaptability within its host environments. One of the main health effects associated with this strain is the development of leaf spot, a condition that can significantly impact the aesthetic and health of the affected plants. Leaf spot diseases are often characterized by the appearance of dark lesions on the leaves, which can lead to defoliation and reduced photosynthetic capacity. Pseudomonas amygdali pv. ulmi strain CFBP 1407 exemplifies the complex interactions between pathogens and their plant hosts. The ability to infect multiple species highlights its potential role in the dynamics of plant health and disease ecology. Understanding this bacterium's pathogenicity is crucial for developing effective management strategies to mitigate its impact on economically important crops and ornamental plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain CFBP 1407

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain CFBP 1407
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Olea europaea, Mallotus japonicus, Loropetalum chinense
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain CFBP 1407 ulmi1407_contig_99,

Gene Summary

Adenine Count

1342831 bp

Thymine Count

1351149 bp

Guanine Count

1859581 bp

Cytosine Count

1848958 bp

Genome Length

6402519 bp

Protein-coding Genes

5300 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAL065_21670Not AvailableNegative3530930 - 353146019550.5
auxin-binding proteinAL065_21675Not AvailableNegative3531722 - 353222518623.9
hypothetical proteinAL065_21680Not AvailablePositive3532441 - 35326989598.83
hypothetical proteinAL065_21685Not AvailablePositive3533119 - 35333709151.09
atp-dependent endonucleaseAL065_21690Not AvailablePositive3533517 - 353585386115.9
hypothetical proteinAL065_21700Not AvailablePositive3538029 - 353901237225.3
hypothetical proteinAL065_21705Not AvailablePositive3539271 - 353966914890.5
type iii effectorAL065_21710Not AvailablePositive3540340 - 354143439738.4
integraseAL065_21715Not AvailablePositive3541874 - 354287237798.4
hypothetical proteinAL065_21720Not AvailableNegative3542966 - 354345118094.6

Displaying genes 3011 – 3020 of 5491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Leaf spotCausesPMC9343901

Displaying health effects 1 – 1 of 1 in total