Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | AL065_20160 | Not Available | Positive | 3196152 - 3196589 | 15336.6 |
| d-3-phosphoglycerate dehydrogenase | AL065_20165 | Not Available | Negative | 3196825 - 3198054 | 44314.4 |
| fad-linked oxidase | AL065_20170 | Not Available | Positive | 3198215 - 3199609 | 51253.3 |
| hypothetical protein | AL065_20175 | Not Available | Positive | 3199676 - 3200341 | 23747.8 |
| dna-binding protein | AL065_20180 | Not Available | Positive | 3200524 - 3201468 | 35260.3 |
| dna-binding protein | AL065_20185 | Not Available | Positive | 3201595 - 3202500 | 33325.6 |
| ribose-5-phosphate isomerase | AL065_20190 | Not Available | Negative | 3202546 - 3203217 | 23353.2 |
| virulence factor family protein | AL065_20205 | Not Available | Negative | 3204506 - 3205840 | 48156.5 |
| hypothetical protein | AL065_20210 | Not Available | Negative | 3205840 - 3208482 | 96401.8 |
| Trna-met | Not Available | Not Available | Positive | 3208832 - 3208908 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







