Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector protein | AL065_16485 | Not Available | Positive | 2334175 - 2335062 | 33335.7 |
| l-asparaginase 1 | AL065_16490 | Not Available | Negative | 2335122 - 2336126 | 35115.3 |
| sodium:alanine symporter | AL065_16495 | Not Available | Negative | 2336156 - 2337607 | 52224.7 |
| class ii fumarate hydratase | AL065_16500 | Not Available | Negative | 2337890 - 2339314 | 51251.2 |
| lysr family transcriptional regulator | AL065_16505 | Not Available | Positive | 2339633 - 2340544 | 33155.1 |
| hypothetical protein | AL065_16510 | Not Available | Negative | 2340583 - 2341197 | 23035.3 |
| n5-carboxyaminoimidazole ribonucleotide mutase | AL065_16515 | Not Available | Positive | 2341576 - 2342067 | 16853.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | AL065_16520 | Not Available | Positive | 2342077 - 2343159 | 38608.2 |
| transglycosylase | AL065_16525 | Not Available | Positive | 2343495 - 2343740 | 8241.63 |
| hypothetical protein | AL065_16530 | Not Available | Positive | 2343823 - 2344356 | 19400.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







