Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AL065_01600 | Not Available | Positive | 1469678 - 1470568 | 31986.7 |
| chemotaxis protein | AL065_01605 | Not Available | Negative | 1470673 - 1472613 | 69818.6 |
| sarcosine oxidase | AL065_01610 | Not Available | Negative | 1472828 - 1473400 | 20755.7 |
| aminomethyltransferase | AL065_01615 | Not Available | Negative | 1473404 - 1476310 | 105836.0 |
| sarcosine oxidase subunit delta | AL065_01620 | Not Available | Negative | 1476307 - 1476612 | 11703.7 |
| sarcosine oxidase subunit beta | AL065_01625 | Not Available | Negative | 1476626 - 1477867 | 45230.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | AL065_01630 | Not Available | Negative | 1477849 - 1478751 | 31420.1 |
| formyltetrahydrofolate deformylase | AL065_01635 | Not Available | Negative | 1478748 - 1479614 | 32639.3 |
| nickel abc transporter substrate-binding protein | AL065_01640 | Not Available | Negative | 1479887 - 1480615 | 26184.4 |
| tonb-dependent receptor | AL065_01645 | Not Available | Negative | 1480654 - 1482765 | 77430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







