Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL065_14100 | Not Available | Negative | 1440586 - 1444185 | 134214.0 |
| isocitrate dehydrogenase | AL065_14105 | Not Available | Negative | 1444609 - 1446840 | 81003.4 |
| cold-shock protein | AL065_14110 | Not Available | Negative | 1447406 - 1447690 | 10239.2 |
| atp-dependent clp protease adaptor clps | AL065_14115 | Not Available | Positive | 1447904 - 1448266 | 13559.2 |
| atp-dependent clp protease atp-binding subunit clpa | AL065_14120 | Not Available | Positive | 1448297 - 1450570 | 83536.9 |
| translation initiation factor if-1 | AL065_14125 | Not Available | Negative | 1450687 - 1450905 | 8303.06 |
| arginyl-trna-protein transferase | AL065_14130 | Not Available | Negative | 1451007 - 1451714 | 27839.2 |
| leucyl/phenylalanyl-trna--protein transferase | AL065_14135 | Not Available | Negative | 1451763 - 1452452 | 26052.8 |
| effector protein hopab1 | AL065_14140 | Not Available | Positive | 1452781 - 1454406 | 59902.6 |
| amino acid abc transporter substrate-binding protein | AL065_01545 | Not Available | Positive | 1455658 - 1456806 | 42728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







