Pseudomonas amygdali pv. ulmi strain CFBP 1407

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain CFBP 1407 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain is of particular interest due to its pathogenic effects on various plant hosts, including Olea europaea (olive), Mallotus japonicus, Loropetalum chinense, and Prunus dulcis (almond). The bacterium has a single replicon, which may influence its genetic stability and adaptability within its host environments. One of the main health effects associated with this strain is the development of leaf spot, a condition that can significantly impact the aesthetic and health of the affected plants. Leaf spot diseases are often characterized by the appearance of dark lesions on the leaves, which can lead to defoliation and reduced photosynthetic capacity. Pseudomonas amygdali pv. ulmi strain CFBP 1407 exemplifies the complex interactions between pathogens and their plant hosts. The ability to infect multiple species highlights its potential role in the dynamics of plant health and disease ecology. Understanding this bacterium's pathogenicity is crucial for developing effective management strategies to mitigate its impact on economically important crops and ornamental plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain CFBP 1407

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain CFBP 1407
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Olea europaea, Mallotus japonicus, Loropetalum chinense
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain CFBP 1407 ulmi1407_contig_99,

Gene Summary

Adenine Count

1342831 bp

Thymine Count

1351149 bp

Guanine Count

1859581 bp

Cytosine Count

1848958 bp

Genome Length

6402519 bp

Protein-coding Genes

5300 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphataseAL065_13990Not AvailablePositive1418050 - 141927946122.5
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseAL065_13995Not AvailableNegative1419380 - 141990419219.4
dihydroneopterin aldolaseAL065_14000Not AvailableNegative1419895 - 142024813007.5
glycerol-3-phosphate acyltransferaseAL065_14005Not AvailablePositive1420323 - 142089220290.5
trna n6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit tsadAL065_14010Not AvailableNegative1420928 - 142195336403.9
30s ribosomal protein s21AL065_14015Not AvailablePositive1422152 - 14223678386.25
dna primaseAL065_14020Not AvailablePositive1422875 - 142483072932.5
rna polymerase subunit sigma-70AL065_14025Not AvailablePositive1424898 - 142674869506.0
diguanylate phosphodiesteraseAL065_14030Not AvailablePositive1427026 - 142950391223.9
Trna-metNot AvailableNot AvailablePositive1429519 - 1429595Not Available

Displaying genes 1251 – 1260 of 5491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Leaf spotCausesPMC9343901

Displaying health effects 1 – 1 of 1 in total