Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AL065_13480 | Not Available | Positive | 1245866 - 1246351 | 17267.7 |
| d-amino-acid oxidase | AL065_13485 | Not Available | Negative | 1246615 - 1247940 | 47213.5 |
| iclr family transcriptional regulator | AL065_13490 | Not Available | Positive | 1249367 - 1250209 | 30881.3 |
| 3-oxoadipate--succinyl-coa transferase | AL065_13495 | Not Available | Positive | 1250410 - 1251267 | 31038.2 |
| 3-oxoadipate--succinyl-coa transferase | AL065_13500 | Not Available | Positive | 1251267 - 1252046 | 27169.4 |
| beta-ketoadipyl coa thiolase | AL065_13505 | Not Available | Positive | 1252046 - 1253245 | 41759.3 |
| alpha-ketoglutarate permease | AL065_13510 | Not Available | Positive | 1253458 - 1254759 | 47273.2 |
| multidrug transporter | AL065_13515 | Not Available | Negative | 1254826 - 1256286 | 53231.5 |
| multidrug transporter | AL065_13520 | Not Available | Negative | 1256283 - 1259417 | 112378.0 |
| efflux transporter periplasmic adaptor subunit | AL065_13525 | Not Available | Negative | 1259421 - 1260581 | 41059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







