Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain CFBP 1407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1342831 bp
Thymine Count
1351149 bp
Guanine Count
1859581 bp
Cytosine Count
1848958 bp
Genome Length
6402519 bp
Protein-coding Genes
5300 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase | AL065_12840 | Not Available | Negative | 1110512 - 1111513 | 35360.8 |
| iditol 2-dehydrogenase | AL065_12845 | Not Available | Negative | 1111554 - 1112669 | 41104.9 |
| short-chain dehydrogenase | AL065_12850 | Not Available | Negative | 1112699 - 1113454 | 26529.9 |
| sugar abc transporter substrate-binding protein | AL065_12855 | Not Available | Negative | 1113676 - 1114686 | 36253.2 |
| sugar abc transporter permease | AL065_12860 | Not Available | Negative | 1114730 - 1115707 | 34153.9 |
| d-ribose transporter atp-binding protein | AL065_12865 | Not Available | Negative | 1115704 - 1117191 | 53567.8 |
| ribose-5-phosphate isomerase | AL065_12870 | Not Available | Positive | 1117473 - 1117934 | 16206.4 |
| dna-binding protein | AL065_12875 | Not Available | Positive | 1118002 - 1118982 | 35452.8 |
| quinoprotein | AL065_12880 | Not Available | Positive | 1119055 - 1121430 | 86000.5 |
| helix-turn-helix transcriptional regulator | AL065_12885 | Not Available | Negative | 1121504 - 1122277 | 28132.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







