Vibrio xuii strain DSM 17185

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio xuii strain DSM 17185 is a marine bacterium primarily found in the Sopapey waters. It is characterized by having a single replicon, which indicates a streamlined genomic structure that can be advantageous for adaptation in its aquatic environment. This strain is known to interact with specific hosts, particularly members of the phylum Mollusca and the shrimp species Penaeus vannamei. The ecological role of Vibrio xuii in its habitat may be significant, as members of the Vibrio genus are often associated with the marine ecosystem's dynamics, influencing both the health of aquatic organisms and the overall microbiome of their environments. Its association with Penaeus vannamei, a commercially important shrimp species, suggests a potential impact on aquaculture practices and the health management of these crustaceans. The strain is cataloged under the accession number LHPK00000000.1, providing a reference for researchers interested in studying its genomic and functional characteristics. Understanding Vibrio xuii strain DSM 17185's interactions with mollusks and shrimp can shed light on its ecological importance and its potential roles in marine food webs, as well as its implications for shrimp farming and the health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio xuii
Strainstrain DSM 17185

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio xuii strain DSM 17185
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSopapey waters
Biotic relationshipNot Available
Host(s)Mollusca, Penaeus vannamei
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio xuii strain DSM 17185 contig3243, whole genome shotgun

Gene Summary

Adenine Count

1740982 bp

Thymine Count

1742131 bp

Guanine Count

1413626 bp

Cytosine Count

1401160 bp

Genome Length

6297899 bp

Protein-coding Genes

6561 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAKJ18_33005Not AvailableNegative5722113 - 572240210588.9
homoserine transporterAKJ18_33010Not AvailableNegative5722519 - 572285411873.8
pterin-4-alpha-carbinolamine dehydrataseAKJ18_33015Not AvailablePositive5722855 - 57230658108.55
chemotaxis proteinAKJ18_33020Not AvailablePositive5723173 - 572360315140.8
protease tlddAKJ18_33025Not AvailableNegative5723604 - 572406516915.8
amidohydrolaseAKJ18_33030Not AvailableNegative5724075 - 572438111107.4
phosphoribosylaminoimidazole carboxylaseAKJ18_34950Not AvailableNegative5724382 - 572468410629.9
n5-carboxyaminoimidazole ribonucleotide mutaseAKJ18_34955Not AvailableNegative5724689 - 57248886686.97
atp-dependent protease atp-binding subunit hsluAKJ18_34960Not AvailableNegative5725226 - 572575519590.2
hypothetical proteinAKJ18_34965Not AvailableNegative5725756 - 572606111616.7

Displaying genes 6091 – 6100 of 6662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.