Vibrio xuii strain DSM 17185

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio xuii strain DSM 17185 is a marine bacterium primarily found in the Sopapey waters. It is characterized by having a single replicon, which indicates a streamlined genomic structure that can be advantageous for adaptation in its aquatic environment. This strain is known to interact with specific hosts, particularly members of the phylum Mollusca and the shrimp species Penaeus vannamei. The ecological role of Vibrio xuii in its habitat may be significant, as members of the Vibrio genus are often associated with the marine ecosystem's dynamics, influencing both the health of aquatic organisms and the overall microbiome of their environments. Its association with Penaeus vannamei, a commercially important shrimp species, suggests a potential impact on aquaculture practices and the health management of these crustaceans. The strain is cataloged under the accession number LHPK00000000.1, providing a reference for researchers interested in studying its genomic and functional characteristics. Understanding Vibrio xuii strain DSM 17185's interactions with mollusks and shrimp can shed light on its ecological importance and its potential roles in marine food webs, as well as its implications for shrimp farming and the health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio xuii
Strainstrain DSM 17185

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio xuii strain DSM 17185
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSopapey waters
Biotic relationshipNot Available
Host(s)Mollusca, Penaeus vannamei
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio xuii strain DSM 17185 contig3243, whole genome shotgun

Gene Summary

Adenine Count

1740982 bp

Thymine Count

1742131 bp

Guanine Count

1413626 bp

Cytosine Count

1401160 bp

Genome Length

6297899 bp

Protein-coding Genes

6561 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorAKJ18_12450Not AvailableNegative2816258 - 281667115585.9
lipoprotein nlpiAKJ18_12455Not AvailableNegative2816775 - 281769234875.1
polynucleotide phosphorylase/polyadenylaseAKJ18_12460Not AvailableNegative2817819 - 281995176792.8
30s ribosomal protein s15AKJ18_12465Not AvailableNegative2820273 - 282054210093.3
5'-methylthioadenosine nucleosidaseAKJ18_12470Not AvailablePositive2820870 - 282156524718.8
adenosylcobinamide-phosphate synthaseAKJ18_12475Not AvailablePositive2821592 - 282254535208.9
vitamin b12-binding proteinAKJ18_12480Not AvailablePositive2822546 - 282336730918.5
hypothetical proteinAKJ18_12485Not AvailablePositive2823440 - 282406022013.8
threonine synthaseAKJ18_12490Not AvailableNegative2824280 - 282556346623.6
serine kinaseAKJ18_12495Not AvailableNegative2825560 - 282651634406.2

Displaying genes 2481 – 2490 of 6662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.