Escherichia coli strain CFSAN026843

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CFSAN026843 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C, and can be found in pairs or singles within its habitat, which is primarily host-associated. The strain has a single replicon and two membranes, indicating its classification as a typical member of the Enterobacteriaceae family. It exhibits a free-living biotic relationship, suggesting its ability to survive independently while also being associated with various hosts. Notably, CFSAN026843 has been linked to a wide range of hosts, including humans (Homo sapiens), domestic animals such as chickens (Gallus gallus) and cattle (Bos taurus), as well as various other mammals and even plants like tomatoes (Solanum lycopersicum). CFSAN026843 is associated with numerous health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as hemolytic uremic syndrome (HUS) and neonatal meningitis. The strain's pathogenicity in humans underscores its role as a significant public health concern, leading to various clinical manifestations ranging from mild diarrhea to severe systemic infections. Ecologically, CFSAN026843's widespread presence across different hosts and environments highlights its adaptability and potential for transmission. Its association with both human health and agricultural animals indicates that monitoring and controlling this strain is crucial for preventing foodborne illnesses and ensuring public health safety.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CFSAN026843

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CFSAN026843
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CFSAN026843


Gene Summary

Adenine Count

1339473 bp

Thymine Count

1335685 bp

Guanine Count

1372396 bp

Cytosine Count

1369908 bp

Genome Length

5417462 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

473 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Mu-like prophage protein gp37WR15_04870Not AvailableNegative1038376 - 103897222459.2
Hypothetical proteinWR15_04875Not AvailableNegative1039026 - 103945716061.9
Mu phage uncharacterized proteinWR15_04880Not AvailableNegative1039461 - 103980212574.9
Putative major head subunit proteinWR15_04885Not AvailableNegative1039806 - 104071433594.7
Hypothetical proteinWR15_04890Not AvailableNegative1040725 - 104112013449.6
Protease (i) and scaffold (z) proteinWR15_04895Not AvailableNegative1041121 - 104223639615.6
Phage virion morphogenesis family proteinWR15_04900Not AvailableNegative1042446 - 104294318668.2
Virion morphogenesis proteinWR15_04905Not AvailableNegative1042994 - 104416043359.9
Portal proteinWR15_04910Not AvailableNegative1044147 - 104574259015.3
TerminaseWR15_04915Not AvailableNegative1045746 - 104738662247.8

Displaying genes 11 – 20 of 5466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total