Azospirillum sp. TSA6c

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum sp. TSA6c is a gram-negative bacterium characterized by a single replicon. This organism is notable within the genus Azospirillum, which is known for its role in promoting plant growth and enhancing nutrient availability in agricultural systems. The strain TSA6c has been cataloged under the accession number LGQS00000000.1, indicating its genomic information is accessible for further research and study. As a member of the Azospirillum genus, TSA6c is likely involved in the biological nitrogen fixation process, which can contribute to soil fertility and support plant health. The gram-negative nature of this bacterium suggests that it possesses a complex cell wall structure, which may influence its interactions with plant roots and other microorganisms in the rhizosphere. The presence of a single replicon in Azospirillum sp. TSA6c indicates a streamlined genomic organization, potentially facilitating efficient replication and adaptation to environmental conditions. Understanding the genomic characteristics of TSA6c can provide insights into its metabolic capabilities and ecological functions. In summary, Azospirillum sp. TSA6c exhibits traits typical of beneficial soil bacteria, with implications for agricultural productivity and soil health. Its ability to interact with plant systems highlights its potential as a biotechnological tool in sustainable agriculture, emphasizing the importance of microbial diversity in ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum sp. TSA6c
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum sp. TSA6c Contig35, whole genome shotgun sequence.

Gene Summary

Adenine Count

1347440 bp

Thymine Count

1358867 bp

Guanine Count

2819257 bp

Cytosine Count

2814415 bp

Genome Length

8341819 bp

Protein-coding Genes

6893 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phasinTSA6c_30990Not AvailableNegative7061429 - 706186315471.5
hypothetical proteinTSA6c_30995Not AvailableNegative7062037 - 706271424391.0
glucuronate isomeraseTSA6c_31000Not AvailableNegative7062915 - 706428551839.0
gntr family transcriptional regulatorTSA6c_31005Not AvailablePositive7064620 - 706540228522.1
cupinTSA6c_31010Not AvailableNegative7065486 - 706586913773.5
3-ketoacyl-acp reductaseTSA6c_31015Not AvailableNegative7065940 - 706669825971.3
5-keto-4-deoxyuronate isomeraseTSA6c_31020Not AvailableNegative7066745 - 706758131224.3
methylglyoxal synthaseTSA6c_31025Not AvailablePositive7067818 - 706827316080.4
gntr family transcriptional regulatorTSA6c_31030Not AvailableNegative7068289 - 706904727879.1
nitrate abc transporter substrate-binding proteinTSA6c_31035Not AvailableNegative7069202 - 707021836034.2

Displaying genes 5921 – 5930 of 7027 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.