Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maf-like protein | ABJ99_4759 | Q4ZNT2 | Negative | 1008833 - 1009435 | 21439.7 |
| rod shape-determining protein mred | ABJ99_4760 | Not Available | Negative | 1009503 - 1009994 | 18499.7 |
| rod shape-determining protein mrec | ABJ99_4761 | P44475 | Negative | 1009987 - 1011063 | 38473.8 |
| rod shape-determining protein mbl | ABJ99_4762 | P0A9X5 | Negative | 1011295 - 1012332 | 37019.9 |
| aspartyl/glutamyl-trnaasn/gln amidotransferase subunit c | ABJ99_4763 | Q48E93 | Positive | 1012538 - 1012825 | 10473.5 |
| glutamyl-trnagln amidotransferase subunit a | ABJ99_4764 | Q4ZNS7 | Positive | 1012840 - 1014291 | 51853.6 |
| aspartyl/glutamyl-trnaasn/gln amidotransferase subunit b | ABJ99_4765 | Q48E91 | Positive | 1014302 - 1015747 | 53077.4 |
| rpla family protein | ABJ99_4766 | Q9PHM1 | Positive | 1016032 - 1016400 | 13326.9 |
| k+-dependent na+/ca+ exchanger related-protein | ABJ99_4767 | Q0ZAI3 | Positive | 1016454 - 1017485 | 36157.2 |
| carboxymuconolactone decarboxylase | ABJ99_4768 | P20370 | Positive | 1017518 - 1017901 | 13942.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









