Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | ABJ99_4699 | G3XDA7 | Negative | 949582 - 950376 | 30172.6 |
| d-alanine--d-alanine ligase | ABJ99_4700 | Q87WY7 | Negative | 950455 - 951414 | 34011.0 |
| udp-n-acetylmuramate--l-alanine ligase | ABJ99_4701 | Q4ZNZ1 | Negative | 951411 - 952871 | 52809.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- pentapeptide pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | ABJ99_4702 | Q87WY5 | Negative | 952864 - 953934 | 37811.2 |
| lipid ii flippase ftsw | ABJ99_4703 | C3KCS9 | Negative | 953924 - 955138 | 44110.0 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | ABJ99_4704 | Q4ZNY8 | Negative | 955135 - 956481 | 48012.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ABJ99_4705 | Q87WY2 | Negative | 956487 - 957569 | 39500.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ABJ99_4706 | P11880 | Negative | 957569 - 958927 | 46527.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2,6- diaminopimelate ligase | ABJ99_4707 | Q87WY0 | Negative | 958932 - 960395 | 52254.4 |
| peptidoglycan glycosyltransferase | ABJ99_4708 | G3XD46 | Negative | 960395 - 962125 | 63118.4 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









