Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ABJ99_4259 | Not Available | Positive | 832943 - 833245 | 10829.2 |
| peptidyl-prolyl cis-trans isomerase | ABJ99_3562 | O08437 | Negative | 833471 - 834241 | 26797.1 |
| uncharacterized protein | ABJ99_3563 | Not Available | Negative | 834448 - 835863 | 52039.1 |
| uncharacterized protein | ABJ99_3564 | Not Available | Positive | 836109 - 836624 | 18393.0 |
| virulence protein | ABJ99_3565 | P0C5H0 | Negative | 836707 - 837096 | 14398.3 |
| uncharacterized protein | ABJ99_3566 | Not Available | Negative | 837265 - 837660 | 13938.6 |
| recombination-associated protein rdgc | ABJ99_3567 | Q48LA4 | Positive | 838206 - 839126 | 34273.3 |
| sodium-dependent transporter | ABJ99_3568 | O34524 | Positive | 839214 - 840164 | 33979.0 |
| acyltransferase family protein | ABJ99_3569 | A8GII5 | Negative | 841329 - 843203 | 68735.3 |
| sensory box histidine kinase/response regulator | ABJ99_3570 | Not Available | Positive | 843445 - 846918 | 127372.0 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









