Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ABJ99_4239 | P22805 | Negative | 808736 - 810142 | 52730.2 |
| amine oxidase | ABJ99_4240 | P86810 | Positive | 810374 - 812230 | 66090.1 |
| cytochrome b561 family protein | ABJ99_4241 | P75925 | Positive | 812587 - 813135 | 20156.2 |
| upf0312 protein precursor | ABJ99_4242 | Q87V70 | Positive | 813163 - 813741 | 20652.4 |
| atp-dependent rna helicase rhle | ABJ99_4243 | Not Available | Negative | 813929 - 815821 | 68097.0 |
| methylenetetrahydrofolate reductase | ABJ99_4244 | O67422 | Negative | 816132 - 816977 | 31371.1 |
| adenosylhomocysteinase | ABJ99_4245 | Q87V73 | Negative | 817167 - 818576 | 51377.7 |
| 4-hydroxybenzoyl-coa thioesterase domain protein | ABJ99_4246 | Not Available | Positive | 818931 - 819326 | 14924.8 |
| hydroxypyruvate isomerase | ABJ99_4247 | Q0KBD1 | Negative | 819544 - 820329 | 29176.5 |
| gluconate transporter family protein | ABJ99_4248 | Q46892 | Negative | 820352 - 821797 | 49938.5 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









