Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4 fimbrial bioproteinis protein pilo | ABJ99_4189 | G3XD51 | Positive | 756416 - 757039 | 23267.2 |
| type iv pilus bioproteinis protein pilp | ABJ99_4190 | G3XCX7 | Positive | 757051 - 757563 | 18537.2 |
| type iv pilus bioproteinis protein pilq | ABJ99_4191 | P34750 | Positive | 757611 - 759689 | 74217.6 |
| shikimate kinase | ABJ99_4192 | Q87V14 | Positive | 759721 - 760212 | 18081.0 |
| 3-dehydroquinate synthase | ABJ99_4193 | Q48PH0 | Positive | 760329 - 761432 | 40085.6 |
| uncharacterized protein | ABJ99_4194 | Not Available | Positive | 761443 - 763074 | 56104.6 |
| glutamate synthase subunit alpha | ABJ99_4195 | E1V8I1 | Positive | 763432 - 767877 | 162587.0 |
| glutamate synthase subunit beta | ABJ99_4196 | E1V8I0 | Positive | 768000 - 769418 | 51733.0 |
| uncharacterized protein | ABJ99_4197 | Not Available | Positive | 769711 - 772959 | 120310.0 |
| uroporphyrinogen decarboxylase | ABJ99_4198 | Q48PG2 | Positive | 773096 - 774160 | 38737.6 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









