Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | ABJ99_4179 | Q48CP3 | Negative | 742976 - 744229 | 44893.3 |
| sporulation related repeat protein | ABJ99_4180 | Not Available | Negative | 744596 - 745291 | 24643.8 |
| arginine--trna ligase | ABJ99_4181 | Q48PI2 | Negative | 745293 - 747029 | 63647.9 |
| primosome assembly protein pria | ABJ99_4182 | P17888 | Negative | 747127 - 749346 | 82027.2 |
| 50s ribosomal protein l31 | ABJ99_4183 | Q87V05 | Positive | 749515 - 749742 | 8169.82 |
| nuclease-like protein | ABJ99_4184 | Not Available | Positive | 749797 - 750564 | 27475.1 |
| malic enzyme family protein | ABJ99_4185 | E1V8J1 | Positive | 750685 - 751953 | 45150.6 |
| penicillin-binding protein 1a | ABJ99_4186 | Q07806 | Negative | 752126 - 754573 | 89684.6 |
| type iv pilus assembly protein pilm | ABJ99_4187 | G3XD28 | Positive | 754780 - 755844 | 38108.9 |
| type 4 fimbrial bioproteinis protein piln | ABJ99_4188 | G3XD30 | Positive | 755844 - 756419 | 21601.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









