Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyltransferase | ABJ99_4169 | Not Available | Positive | 731097 - 731996 | 33954.7 |
| uncharacterized protein | ABJ99_4170 | Not Available | Negative | 731976 - 732539 | 18546.2 |
| glutathione-independent formaldehyde dehydrogenase | ABJ99_4171 | Not Available | Negative | 733847 - 734008 | 5461.55 |
| uncharacterized protein | ABJ99_4172 | Not Available | Positive | 734151 - 735188 | 38145.1 |
| glutathione-independent formaldehyde dehydrogenase | ABJ99_4173 | Not Available | Negative | 735337 - 736536 | 41788.4 |
| formyltetrahydrofolate deformylase | ABJ99_4174 | Q46339 | Negative | 736638 - 737495 | 32230.5 |
| sarcosine oxidase subunit gamma | ABJ99_4175 | Q46338 | Negative | 737710 - 738342 | 23020.7 |
| sarcosine oxidase subunit alpha | ABJ99_4176 | Q46337 | Negative | 738379 - 741399 | 109505.0 |
| sarcosine oxidase | ABJ99_4177 | Not Available | Negative | 741396 - 741692 | 11421.4 |
| sarcosine oxidase | ABJ99_4178 | Not Available | Negative | 741708 - 742958 | 45286.1 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









