Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | ABJ99_4159 | Not Available | Positive | 720447 - 721835 | 50554.7 |
| hth-type transcriptional regulator beti | ABJ99_4160 | Q88AF0 | Positive | 722184 - 722777 | 22022.6 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | ABJ99_4161 | Q4ZM62 | Positive | 722883 - 724355 | 53174.3 |
| oxygen-dependent choline dehydrogenase | ABJ99_4162 | Q4ZM63 | Positive | 724502 - 726208 | 62746.5 |
| rna polymerase sigma factor | ABJ99_4163 | P23484 | Positive | 726713 - 727189 | 18303.1 |
| transmembrane sensor | ABJ99_4164 | Not Available | Positive | 727186 - 728169 | 35697.8 |
| pepsy-associated tm helix | ABJ99_4165 | Not Available | Positive | 728288 - 729421 | 41623.8 |
| uncharacterized protein | ABJ99_4166 | Not Available | Positive | 729418 - 729600 | 6328.84 |
| glutathione s-transferase domain-containing protein | ABJ99_4167 | P0ACA2 | Positive | 729670 - 730299 | 23554.0 |
| uncharacterized protein | ABJ99_4168 | Not Available | Negative | 730400 - 730903 | 18581.3 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









