Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ABJ99_4119 | P25535 | Positive | 678692 - 679921 | 45178.3 |
| arac family transcriptional regulator | ABJ99_4120 | P72171 | Negative | 679993 - 680985 | 36708.2 |
| mfs transporter | ABJ99_4121 | P0AA79 | Positive | 681638 - 682921 | 46087.8 |
| uncharacterized protein | ABJ99_4122 | Not Available | Positive | 683135 - 683716 | 21985.0 |
| fis family transcriptional regulator | ABJ99_4123 | Q845S7 | Positive | 683799 - 684749 | 34482.2 |
| nlpa lipoprotein | ABJ99_4124 | O32167 | Positive | 684920 - 685702 | 28257.1 |
| peptide methionine sulfoxide reductase msra | ABJ99_4125 | Q88AI5 | Negative | 685986 - 686633 | 23434.7 |
| sensory box/ggdef domain/eal domain-containing protein | ABJ99_4126 | Not Available | Negative | 686781 - 689480 | 101169.0 |
| major facilitator transporter | ABJ99_4127 | Q6D2A9 | Negative | 689727 - 691139 | 49987.0 |
| uncharacterized protein | ABJ99_4128 | Not Available | Negative | 691149 - 692474 | 48558.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









