Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | ABJ99_4099 | Not Available | Negative | 652907 - 653500 | 23025.6 |
| diaminopimelate decarboxylase | ABJ99_4100 | Q4JAZ8 | Positive | 654556 - 656649 | 78720.7 |
| uncharacterized protein | ABJ99_4101 | P39314 | Positive | 658424 - 659383 | 34944.5 |
| transposase is66 | ABJ99_4102 | Not Available | Negative | 659388 - 659534 | 5630.78 |
| uncharacterized protein | ABJ99_4103 | Not Available | Negative | 666399 - 667631 | 43802.0 |
| oxidoreductase zinc-binding protein | ABJ99_4104 | A7RK30 | Negative | 667712 - 668119 | 14765.7 |
| uncharacterized protein | ABJ99_4105 | Not Available | Negative | 668292 - 668825 | 20025.3 |
| pyocin immunity protein | ABJ99_4106 | Q03708 | Negative | 669163 - 669435 | 10625.5 |
| s-type pyocin | ABJ99_4107 | Q06583 | Negative | 669432 - 670787 | 49254.9 |
| pyocin/colicin protein | ABJ99_4108 | Not Available | Negative | 670887 - 671081 | 6885.99 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









