Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| morn repeat family protein | ABJ99_3818 | Not Available | Positive | 345750 - 347477 | 62248.4 |
| nucleoside-diphosphate-sugar epimerase | ABJ99_3819 | P45469 | Positive | 347505 - 348146 | 23343.5 |
| lipoprotein | ABJ99_3820 | Not Available | Negative | 348434 - 348706 | 8906.03 |
| aromatic acid decarboxylase | ABJ99_3821 | Q9HX08 | Negative | 348711 - 349340 | 22704.6 |
| udp-n-acetylmuramatel-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ABJ99_3822 | P37773 | Negative | 349337 - 350686 | 48273.2 |
| unknown protein sequence | ABJ99_3823 | Not Available | Positive | 350681 - 350809 | 4922.89 |
| unknown protein sequence | ABJ99_3824 | Not Available | Negative | 350778 - 350906 | 4191.12 |
| aldehyde dehydrogenase | ABJ99_3825 | Q9ZAA1 | Positive | 350910 - 352430 | 54805.5 |
| ethanolamine ammonia lyase large subunit | ABJ99_3826 | P0AEJ7 | Positive | 352859 - 354253 | 50444.4 |
| ethanolamine ammonia-lyase light chain | ABJ99_3827 | Q889M3 | Positive | 354265 - 355113 | 30469.2 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









