Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cilantro strain 0788_9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1194266 bp
Thymine Count
1200548 bp
Guanine Count
1691002 bp
Cytosine Count
1685739 bp
Genome Length
5923202 bp
Protein-coding Genes
5201 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn | ABJ99_4799 | A5F379 | Positive | 1052123 - 1053796 | 61324.6 |
| ferric uptake regulator protein fur | ABJ99_4800 | Q03456 | Negative | 1053841 - 1054248 | 15314.3 |
| outer membrane protein assembly factor bame precursor | ABJ99_4801 | O68564 | Positive | 1054347 - 1054868 | 19008.6 |
| upf0125 protein | ABJ99_4802 | Q87WN4 | Negative | 1054935 - 1055249 | 11357.9 |
| cyclase/dehydrase | ABJ99_4803 | O68560 | Negative | 1055242 - 1055676 | 15889.1 |
| transporter | ABJ99_4804 | O34383 | Negative | 1055684 - 1057120 | 52147.9 |
| ssra-binding protein | ABJ99_4805 | Q4ZNN9 | Positive | 1057201 - 1057683 | 18385.3 |
| uncharacterized protein | ABJ99_4806 | Not Available | Positive | 1057963 - 1058247 | 9845.68 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 1058361 - 1058752 | Not Available |
| integrase | ABJ99_4807 | Q53201 | Positive | 1059599 - 1059886 | 10667.9 |
Pathways
1315 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









