Herpetosiphon geysericola strain DSM 7119

Gram-negativeFilamentousaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Chloroflexia

Order

Herpetosiphonales

Family

Herpetosiphonaceae

Genus

Herpetosiphon

Description

Herpetosiphon geysericola strain DSM 7119 is a Gram-negative, filamentous bacterium that requires oxygen for growth, classifying it as aerobic. This strain is characterized by the presence of flagella, which contribute to its motility. It has a single replicon, indicating a streamlined genomic structure. The strain is cataloged with the accession number LGKP00000000.1, which provides a reference for genetic and genomic studies. Being filamentous in shape, H. geysericola may play important roles in its ecological niche, particularly in the environments where it is found. Biologically, filamentous bacteria like H. geysericola can contribute to the formation of microbial mats and biofilms, serving as key players in nutrient cycling and ecosystem dynamics. Their aerobic nature suggests they may thrive in oxygen-rich environments, potentially influencing microbial community structure and function in such habitats. Understanding the traits of H. geysericola can enhance our knowledge of microbial diversity and its ecological implications in various ecosystems.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassChloroflexia
OrderHerpetosiphonales
FamilyHerpetosiphonaceae
GenusHerpetosiphon
SpeciesHerpetosiphon geysericola
Strainstrain DSM 7119

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herpetosiphon geysericola strain DSM 7119 contig_18, whole genome

Gene Summary

Adenine Count

1495696 bp

Thymine Count

1528570 bp

Guanine Count

1573841 bp

Cytosine Count

1542305 bp

Genome Length

6140412 bp

Protein-coding Genes

4688 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSE18_14205Q7MUY1Negative3354414 - 335518127932.6
hypothetical proteinSE18_14210Not AvailablePositive3355298 - 335606227457.8
hypothetical proteinSE18_14215P29538Positive3356117 - 335692630348.1
hypothetical proteinSE18_14225Not AvailableNegative3357538 - 335791814181.7
hypothetical proteinSE18_14230Not AvailableNegative3358131 - 335933943276.9
molecular chaperone hsp90SE18_14235Q24VT7Positive3359666 - 336154070802.7
hypothetical proteinSE18_14245P16699Positive3362653 - 336473774642.0
hypothetical proteinSE18_14250Not AvailablePositive3365132 - 336726776821.4
hypothetical proteinSE18_14255Q9XIG1Negative3367272 - 336852545289.3
fad-dependent oxidoreductaseSE18_14260Q4L608Negative3368761 - 337035058692.6

Displaying genes 2541 – 2550 of 4741 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

237 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 237 metabolites

Health Effects

No health effects information available for this bacterium.