Actinobaculum suis strain U311

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinobaculum

Description

Actinobaculum suis strain U311 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This organism is primarily associated with Sus scrofa (domestic pigs) and belongs to the Suidae family. It is known to have a single replicon and is identified by the accession number LFUS00000000.1. Actinobaculum suis is notable for its role in various health issues in pigs. It is implicated in urinary tract infections, cystitis, and infections of the urogenital tract in sows. These infections can pose significant health risks to affected animals, leading to complications that may impact overall herd health and productivity. The pathogenicity of Actinobaculum suis is particularly evident in pigs, suggesting a specialized adaptation to its hosts. Understanding the specific interactions between this bacterium and its porcine hosts is crucial for managing health concerns in swine populations. The presence of urinary and urogenital infections highlights a potential area for further research into prevention and treatment strategies, as well as the development of effective management practices to reduce the prevalence of these infections in commercial pig farming.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinobaculum
SpeciesActinobaculum suis
Strainstrain U311

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Sus scrofa, Suidae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitypigs

Genome Summary

Actinobaculum suis strain U311 R9-3-1_contig_59, whole genome

Gene Summary

Adenine Count

496917 bp

Thymine Count

498879 bp

Guanine Count

679772 bp

Cytosine Count

681873 bp

Genome Length

2358658 bp

Protein-coding Genes

1633 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Scaffolding proteinACU19_04890Not AvailablePositive1183738 - 118430720209.5
Major capsid proteinACU19_04895Not AvailablePositive1184329 - 118522832885.8
Hypothetical proteinACU19_04900Not AvailablePositive1185262 - 118557010623.2
hypothetical proteinACU19_04905Not AvailablePositive1185985 - 118637714217.0
hypothetical proteinACU19_04910Not AvailablePositive1186451 - 118678611861.4
hypothetical proteinACU19_04920Not AvailablePositive1187194 - 118763716577.7
hypothetical proteinACU19_04925Not AvailablePositive1187663 - 11878968659.28
Major tail proteinACU19_04930Not AvailablePositive1187896 - 118843819172.4
molecular chaperone groesACU19_00010C5BZX2Negative2991 - 328710656.6
o-sialoglycoprotein endopeptidaseACU19_00015Q47LN7Negative3535 - 457836305.3

Displaying genes 31 – 40 of 1705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

123 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 123 metabolites

Health Effects

Health ConditionRelationReference
Infections of the urogenital tract of sowsCausesPMC7788979
Infections of the urogenital tract in sowsCausesPMC7788979
CystitisCausesPMC7788979
Urinary tract infectionCausesPMC6261818

Displaying health effects 1 – 4 of 4 in total